Single cell proteomic analysis defines discrete neutrophil functional states in human glioblastoma
Pranvera Sadiku, A. Brenes, Rupert L. Mayer, Leila Reyes, P. Coelho, Gabi van Stralen, Ailiang Zhang, Manuel A. Sanchez-Garcia, E. Watts, I. Liaquat, Andrew J. M. Howden, Ikeoluwa Adekoya, A. Boldbaatar, A. MacRaild, Sarah Risbridger, Gillian M. Morrison, H. MacPherson, C. Bruce, Shonna Johnston, R. Grecian, F. Murphy, Steven M Pollard, Paul M Brennan, K. Mechtler, Sarah R. Walmsley
Nature Communications, vol. 17(1), 2025
Christa P Baker, R. Bruderer, James Abbott, J. S. C. Arthur, A. Brenes
Journal of Proteome Research, 2024
Calculating and Reporting Coefficients of Variation for DIA-Based Proteomics
Alejandro J. Brenes
Journal of Proteome Research, vol. 23, 2024 Dec, pp. 5274--5278
Extensive acute and sustained changes to neutrophil proteomes post-SARS-CoV-2 infection
M. Long, A. Howden, Holly R. Keir, C. Rollings, Y. H. Giam, T. Pembridge, Lilia Delgado, H. Abo-Leyah, A. Lloyd, Gabriel Sollberger, R. Hull, A. Gilmour, Chloe Hughes, B. J. New, D. Cassidy, A. Shoemark, H. Richardson, A. Lamond, D. A. Cantrell, James D. Chalmers, A. Brenes
European Respiratory Journal, 2023
The Immunological Proteome Resource
Alejandro J. Brenes, Angus I. Lamond, Doreen A. Cantrell
Nature Immunology, vol. 24, 2023 May, p. 731
Tissue environment, not ontogeny, defines murine intestinal intraepithelial T lymphocytes
A. Brenes, M. Vandereyken, Olivia J. James, Harriet J. Watt, J. Hukelmann, Laura Spinelli, D. Dikovskaya, A. Lamond, M. Swamy
eLife, 2021
A. Brenes, Harunori Yoshikawa, D. Bensaddek, B. Mirauta, D. Seaton, J. Hukelmann, Hao Jiang, O. Stegle, A. Lamond
2020
Multibatch TMT Reveals False Positives, Batch Effects and Missing Values*
A. Brenes, J. Hukelmann, D. Bensaddek, A. Lamond
Molecular & Cellular Proteomics, 2019